ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 42284.00 83.46 73.38 87.41 SNORD53B-201 snoRNA heart (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 363.00 0.72 0.63 32.85 SNORD53B-201 snoRNA heart (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 388.00 93.49 0.67 100.0 ENST00000578036 lncRNA heart (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 4089.00 89.12 7.10 100.0 RPL23A-207 protein coding heart (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1359.00 85.53 2.36 100.0 MIR744-201 miRNA heart (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 13154.00 73.49 22.83 100.0 MIR378C-201 miRNA heart (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 1547.00 21.76 2.68 54.99 MIR142HG-201 lncRNA heart (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 4294.00 60.39 7.45 83.57 MIR142HG-201 lncRNA heart (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 71.00 1.00 0.12 100.0 MIR142HG-201 lncRNA heart (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 865.00 8.42 1.50 100.0 SNORD3C-201 snoRNA heart (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 368.30 0.17 0.64 67.83 RPL23A-208 retained intron heart (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 146.86 0.07 0.25 43.71 RPL23A-208 retained intron heart (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 159998.00 74.99 277.66 85.37 RPL23A-208 retained intron heart (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 50147.00 23.50 87.02 89.54 RPL23A-208 retained intron heart (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 10392.00 1.12 18.03 100.0 MIR133A1HG-202 lncRNA heart (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 7000.00 2.38 12.15 35.46 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 17546.00 5.96 30.45 30.75 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 512.00 0.17 0.89 100.0 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 184392.00 62.63 319.99 96.73 RPL17-211 retained intron heart (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 76038.00 25.83 131.96 96.5 RPL17-211 retained intron heart (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 7470.00 44.24 12.96 70.48 ENST00000582320 lncRNA heart (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 3102.00 18.37 5.38 100.0 ENST00000582320 lncRNA heart (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 1740.00 10.30 3.02 100.0 ENST00000582320 lncRNA heart (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 899.00 1.83 1.56 100.0 RPL17-214 retained intron heart (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 16883.80 34.28 29.30 42.43 RPL17-214 retained intron heart (Tissue)