ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1511.00 0.48 2.62 100.0 MT-TE-201 Mt tRNA heart (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 3154.00 21.92 5.47 100.0 MT-RNR1-201 Mt rRNA heart (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1.00 0.01 0.00 100.0 MT-RNR1-201 Mt rRNA heart (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 2929.00 82.90 5.08 100.0 MIR454-201 miRNA heart (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 2475.00 74.71 4.30 100.0 MIR501-201 miRNA heart (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 5511.00 92.42 9.56 100.0 MIR769-201 miRNA heart (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 63.00 75.90 0.11 100.0 KRTAP19-1-201 protein coding heart (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 266.00 32.09 0.46 100.0 MIR708-201 miRNA heart (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 16.00 80.00 0.03 100.0 MIR509-3-201 miRNA heart (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 59.00 50.43 0.10 100.0 MIR543-201 miRNA heart (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 544.00 97.14 0.94 100.0 MIR301B-201 miRNA heart (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1071.00 41.93 1.86 75.0 RNU1-82P-201 snRNA heart (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 28.00 0.16 0.05 100.0 SNORD66-201 snoRNA heart (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 6597.00 38.13 11.45 84.72 SNORD66-201 snoRNA heart (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 3605.00 20.84 6.26 100.0 SNORD66-201 snoRNA heart (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 781.00 4.51 1.36 100.0 SNORD66-201 snoRNA heart (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 678.00 80.91 1.18 100.0 U3.17-201 snoRNA heart (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2768.00 78.41 4.80 100.0 SNORD17-201 snoRNA heart (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 394.00 51.24 0.68 100.0 SNORD72-201 snoRNA heart (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 4669.00 82.24 8.10 100.0 SNORD70B-201 snoRNA heart (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 11687.00 66.62 20.28 95.99 RNY4P18-201 misc RNA heart (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 66838.00 92.76 115.99 100.0 SNORD90-201 snoRNA heart (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 960.00 1.33 1.67 14.65 SNORD90-201 snoRNA heart (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1071.00 1.12 1.86 100.0 SNORD69-201 snoRNA heart (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1448.00 1.52 2.51 100.0 SNORD69-201 snoRNA heart (Tissue)