ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 974.02 8.90 2.53 42.4 RNY1-201 misc RNA skin of body (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 206.00 1.88 0.54 100.0 RNY1-201 misc RNA skin of body (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 1630.00 14.89 4.24 100.0 RNY1-201 misc RNA skin of body (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 61.00 20.47 0.16 100.0 SNORD115-42-201 snoRNA skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 159.00 2.37 0.41 100.0 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1.00 0.01 0.00 100.0 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 579.16 8.64 1.51 42.37 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1258.00 18.77 3.27 100.0 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 2.00 0.03 0.01 100.0 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 4.80 0.07 0.01 25.26 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 5.00 0.07 0.01 100.0 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 47.00 0.70 0.12 100.0 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 13.75 0.21 0.04 62.49 RNA5SP202-201 rRNA pseudogene skin of body (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 27562.00 43.88 71.66 100.0 SNORD114-9-201 snoRNA skin of body (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 28216.00 44.92 73.36 100.0 SNORD114-9-201 snoRNA skin of body (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 271.00 1.54 0.70 100.0 Y_RNA.234-201 misc RNA skin of body (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 17.00 27.42 0.04 100.0 SNORD115-23-201 snoRNA skin of body (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 20.00 0.86 0.05 100.0 RNA5SP141-201 rRNA pseudogene skin of body (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 1964.00 45.78 5.11 100.0 SNORD114-15-201 snoRNA skin of body (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 398.00 45.18 1.03 100.0 ENST00000364722 snoRNA skin of body (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 99.00 28.70 0.26 100.0 SNORD115-15-201 snoRNA skin of body (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 1660.00 29.04 4.32 100.0 SNORD113-3-201 snoRNA skin of body (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 15381.00 62.73 39.99 100.0 SNORD52-201 snoRNA skin of body (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2019.00 16.11 5.25 25.73 SNORD117-201 snoRNA skin of body (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 5827.00 46.49 15.15 81.6 SNORD117-201 snoRNA skin of body (Tissue)