ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1048.00 0.90 2.72 100.0 SNORD12B-201 snoRNA skin of body (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 132.00 0.11 0.34 100.0 SNORD12B-201 snoRNA skin of body (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 107623.00 92.42 279.83 98.08 SNORD12B-201 snoRNA skin of body (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 4010.00 47.73 10.43 100.0 Y_RNA.609-201 misc RNA skin of body (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 407.00 39.78 1.06 100.0 Y_RNA.612-201 misc RNA skin of body (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 38348.00 88.46 99.71 98.37 SNORD71-201 snoRNA skin of body (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 1164.00 2.69 3.03 100.0 SNORD71-201 snoRNA skin of body (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 430.00 0.99 1.12 100.0 SNORD71-201 snoRNA skin of body (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 7095.00 80.73 18.45 94.75 MIR194-2HG-201 lncRNA skin of body (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 823.00 9.36 2.14 53.62 MIR194-2HG-201 lncRNA skin of body (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 14.00 0.15 0.04 100.0 LINC01783-201 lncRNA skin of body (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 47.00 75.81 0.12 100.0 RPS7P15-201 processed pseudogene skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 167.00 1.55 0.43 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 391.00 3.63 1.02 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1446.00 13.41 3.76 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 2266.00 21.02 5.89 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 528.00 4.90 1.37 85.16 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 28.00 75.68 0.07 100.0 MRPL32-203 nonsense mediated decay skin of body (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 383.00 85.87 1.00 100.0 ENST00000436739 lncRNA skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1947.00 6.29 5.06 59.09 TMEM107-204 protein coding skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 1870.00 6.04 4.86 100.0 TMEM107-204 protein coding skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 3142.00 10.16 8.17 100.0 TMEM107-204 protein coding skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 80.00 0.26 0.21 100.0 TMEM107-204 protein coding skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 3810.00 12.31 9.91 86.32 TMEM107-204 protein coding skin of body (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 2397.00 57.41 6.23 87.96 SNHG16-201 lncRNA skin of body (Tissue)