ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 831.00 58.81 3.60 100.0 SNORD115-44-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 3.00 1.00 0.01 100.0 RNA5SP77-201 rRNA pseudogene skeletal muscle tissue (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 192859.00 32.78 836.41 100.0 SNORD114-22-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 361589.00 61.46 1568.18 96.23 SNORD114-22-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 907.00 3.66 3.93 100.0 SNORD6-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 22158.00 89.43 96.10 100.0 SNORD6-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 353.00 7.85 1.53 100.0 RNY3-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 4198.18 7.36 18.21 41.14 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 694.00 1.22 3.01 100.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 5772.06 10.11 25.03 56.57 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 431.00 0.76 1.87 100.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 175.00 0.31 0.76 100.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 37973.00 66.54 164.69 98.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2965.00 5.20 12.86 89.04 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 9873.00 93.19 42.82 94.74 MIR146B-201 miRNA skeletal muscle tissue (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 47.00 42.73 0.20 100.0 SNHG20-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 279.00 11.20 1.21 100.0 ATP5MK-205 protein coding skeletal muscle tissue (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 1158.00 46.49 5.02 100.0 ATP5MK-205 protein coding skeletal muscle tissue (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 48.00 26.52 0.21 100.0 LINC01556-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 70.00 64.81 0.30 100.0 ATAD3A-202 protein coding skeletal muscle tissue (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 2553.00 53.78 11.07 74.47 TMC5-202 protein coding skeletal muscle tissue (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 29.00 80.56 0.13 100.0 ZMYM2-203 protein coding skeletal muscle tissue (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 176.00 3.67 0.76 100.0 RNVU1-7-201 snRNA skeletal muscle tissue (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1172.00 42.95 5.08 100.0 SNORD24-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 260.00 69.15 1.13 100.0 Y_RNA.389-201 misc RNA skeletal muscle tissue (Tissue)