ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 172.00 0.02 0.75 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 667.00 0.07 2.89 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 41053.00 4.33 178.04 63.28 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 477.00 0.05 2.07 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 184195.00 19.42 798.84 97.93 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 665.00 0.07 2.88 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 367.00 0.04 1.59 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 2.00 0.00 0.01 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 53998.00 5.69 234.18 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1066.00 0.11 4.62 79.26 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 647.28 0.07 2.81 56.93 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 193.00 0.02 0.84 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1250.00 0.13 5.42 65.51 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 642.00 0.07 2.78 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 1371.00 0.14 5.95 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1255.00 0.13 5.44 100.0 SNHG1-248 lncRNA skeletal muscle tissue (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 53557.00 44.45 232.27 100.0 SNHG14-315 lncRNA skeletal muscle tissue (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 23078.00 19.16 100.09 89.86 SNHG14-315 lncRNA skeletal muscle tissue (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 29009.00 24.08 125.81 86.33 SNHG14-315 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 914.00 4.55 3.96 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 2886.80 14.36 12.52 38.6 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 28.00 0.14 0.12 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 309.00 1.54 1.34 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 5387.92 26.81 23.37 64.17 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 3859.00 19.20 16.74 88.94 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)