ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 72.00 16.94 0.31 100.0 SCARNA4-202 scaRNA skeletal muscle tissue (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 498.00 72.91 2.16 100.0 ENST00000625572 miRNA skeletal muscle tissue (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 10202.00 93.57 44.25 100.0 ENST00000628177 snoRNA skeletal muscle tissue (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 3820.00 93.72 16.57 100.0 ENST00000630615 snoRNA skeletal muscle tissue (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 256.00 72.93 1.11 100.0 DMRT2-209 protein coding skeletal muscle tissue (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 3.00 0.85 0.01 100.0 DMRT2-209 protein coding skeletal muscle tissue (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 504.00 19.18 2.19 100.0 SNORD98-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 1667.00 63.43 7.23 100.0 SNORD98-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 71691.77 39.59 310.92 42.82 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 737.41 0.41 3.20 37.82 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 96.00 0.05 0.42 100.0 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1167.23 0.64 5.06 59.86 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 3426.00 12.17 14.86 100.0 MEG8-222 lncRNA skeletal muscle tissue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 11382.00 40.45 49.36 100.0 MEG8-222 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 2841.00 5.94 12.32 94.48 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 19812.00 41.44 85.92 90.81 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 6760.00 14.14 29.32 100.0 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 3572.00 7.47 15.49 89.77 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 119.00 0.25 0.52 100.0 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 975.00 2.04 4.23 41.81 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 2683.00 5.61 11.64 75.77 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1524.00 3.19 6.61 53.19 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 347.75 18.93 1.51 66.37 5S_rRNA.20-201 rRNA pseudogene skeletal muscle tissue (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 326.00 4.55 1.41 100.0 HSPA9-211 retained intron skeletal muscle tissue (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 2632.00 36.76 11.41 57.69 HSPA9-211 retained intron skeletal muscle tissue (Tissue)