ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 420.00 32.89 1.82 100.0 RNU2-36P-201 snRNA skeletal muscle tissue (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 465.00 0.87 2.02 100.0 SNORD19C-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 50515.00 95.04 219.08 98.49 SNORD19C-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2526.00 2.25 10.96 100.0 SNORD12B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 10.00 0.01 0.04 100.0 SNORD12B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 105877.00 94.10 459.18 99.02 SNORD12B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 2248.00 47.27 9.75 100.0 Y_RNA.609-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 242.00 34.38 1.05 100.0 Y_RNA.612-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 743.00 2.07 3.22 100.0 SNORD71-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 528.00 1.47 2.29 100.0 SNORD71-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 33563.00 93.50 145.56 98.72 SNORD71-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1275.00 13.17 5.53 59.33 MIR194-2HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 7789.00 80.45 33.78 93.08 MIR194-2HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 1.00 0.06 0.00 100.0 LINC01783-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 75.00 96.15 0.33 100.0 RPS7P15-201 processed pseudogene skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 2459.00 43.00 10.66 94.98 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 540.00 9.44 2.34 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 29.00 0.51 0.13 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 124.00 2.17 0.54 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 683.00 11.94 2.96 100.0 SNORD62B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 48.00 87.27 0.21 100.0 MRPL32-203 nonsense mediated decay skeletal muscle tissue (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 146.00 91.25 0.63 100.0 ENST00000436739 lncRNA skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 420.00 7.51 1.82 100.0 TMEM107-204 protein coding skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 61.00 1.09 0.26 100.0 TMEM107-204 protein coding skeletal muscle tissue (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 276.00 4.93 1.20 82.39 TMEM107-204 protein coding skeletal muscle tissue (Tissue)