ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 1328.00 63.21 3.01 100.0 SNORD115-44-201 snoRNA lung (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 121.00 37.81 0.27 100.0 RNA5SP77-201 rRNA pseudogene lung (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 28011.00 51.33 63.52 100.0 SNORD114-22-201 snoRNA lung (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 24641.00 45.16 55.88 98.59 SNORD114-22-201 snoRNA lung (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 2057.00 10.75 4.66 100.0 SNORD6-201 snoRNA lung (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 14717.00 76.90 33.37 100.0 SNORD6-201 snoRNA lung (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 443.00 3.46 1.00 100.0 RNY3-201 misc RNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 12512.77 12.31 28.38 44.47 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 759.00 0.75 1.72 100.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 15352.30 15.11 34.82 54.56 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 595.00 0.59 1.35 100.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1542.00 1.52 3.50 100.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 47284.00 46.54 107.23 98.41 SNORD82-201 snoRNA lung (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 14029.00 13.81 31.81 92.0 SNORD82-201 snoRNA lung (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 97568.00 93.57 221.26 95.24 MIR146B-201 miRNA lung (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 669.00 79.27 1.52 100.0 SNHG20-201 lncRNA lung (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 322.00 30.15 0.73 100.0 ATP5MK-205 protein coding lung (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 108.00 10.11 0.24 100.0 ATP5MK-205 protein coding lung (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 3.00 7.14 0.01 100.0 LINC01556-201 lncRNA lung (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 21.00 19.27 0.05 100.0 ATAD3A-202 protein coding lung (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 3703.00 64.87 8.40 78.54 TMC5-202 protein coding lung (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 16.00 23.19 0.04 100.0 ZMYM2-203 protein coding lung (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 313.00 4.01 0.71 100.0 RNVU1-7-201 snRNA lung (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1661.00 39.84 3.77 100.0 SNORD24-201 snoRNA lung (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 7.00 3.89 0.02 100.0 Y_RNA.389-201 misc RNA lung (Tissue)