ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 211.00 18.38 0.48 100.0 SCARNA4-202 scaRNA lung (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 2670.00 74.00 6.05 100.0 ENST00000625572 miRNA lung (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 31142.00 93.98 70.62 100.0 ENST00000628177 snoRNA lung (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1198.00 89.34 2.72 100.0 ENST00000630615 snoRNA lung (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 17.00 17.00 0.04 100.0 DMRT2-209 protein coding lung (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 19.00 19.00 0.04 100.0 DMRT2-209 protein coding lung (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1222.00 20.68 2.77 100.0 SNORD98-201 snoRNA lung (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 2686.00 45.46 6.09 100.0 SNORD98-201 snoRNA lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 149103.10 53.44 338.13 57.14 MIR106AHG-201 lncRNA lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 1042.06 0.37 2.36 25.39 MIR106AHG-201 lncRNA lung (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 224.00 0.08 0.51 100.0 MIR106AHG-201 lncRNA lung (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 2847.37 1.02 6.46 69.38 MIR106AHG-201 lncRNA lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 8233.00 58.99 18.67 100.0 MEG8-222 lncRNA lung (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 2992.00 21.44 6.79 100.0 MEG8-222 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 20378.00 10.55 46.21 95.02 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 101368.00 52.49 229.88 91.64 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 25946.00 13.43 58.84 100.0 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 353.00 0.18 0.80 88.03 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 807.00 0.42 1.83 100.0 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 6268.00 3.25 14.21 59.17 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 3459.00 1.79 7.84 68.69 SNHG14-224 lncRNA lung (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 3780.00 1.96 8.57 66.36 SNHG14-224 lncRNA lung (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 506.07 26.15 1.15 73.77 5S_rRNA.20-201 rRNA pseudogene lung (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 358.00 5.48 0.81 100.0 HSPA9-211 retained intron lung (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 750.00 11.48 1.70 27.51 HSPA9-211 retained intron lung (Tissue)