ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 30.00 0.00 0.07 100.0 C19orf48P-203 retained intron lung (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 16.00 0.00 0.04 100.0 C19orf48P-203 retained intron lung (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 1.00 33.33 0.00 100.0 ENST00000597420 lncRNA lung (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 434.00 10.39 0.98 100.0 RPS11-206 retained intron lung (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 2463.00 58.94 5.59 100.0 RPS11-206 retained intron lung (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 377966.00 63.66 857.14 65.75 CARMN-209 lncRNA lung (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 5620.00 64.89 12.74 100.0 ENST00000602478 lncRNA lung (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 24.00 12.12 0.05 100.0 PPFIA1P1-201 processed pseudogene lung (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 969.00 25.76 2.20 100.0 SNORD114-21-201 snoRNA lung (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1968.00 52.31 4.46 100.0 SNORD114-21-201 snoRNA lung (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 10.00 1.11 0.02 100.0 SNORD115-40-201 snoRNA lung (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 17958.00 97.92 40.72 100.0 MIR98-201 miRNA lung (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 6788.00 93.19 15.39 100.0 SNORD113-5-201 snoRNA lung (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 4899.00 91.91 11.11 100.0 MIR15A-201 miRNA lung (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 544.00 80.71 1.23 100.0 MIR376C-201 miRNA lung (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 940.00 49.55 2.13 100.0 SNHG21-206 retained intron lung (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 248.00 36.58 0.56 100.0 SNORD11B-201 snoRNA lung (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1972.00 59.47 4.47 100.0 SNORD91B-201 snoRNA lung (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 10418.00 49.20 23.63 67.36 SNORD91A-201 snoRNA lung (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 118680.00 47.52 269.14 97.0 MIR486-1-201 miRNA lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 37601.00 44.56 85.27 75.55 NOP56-219 retained intron lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1046.00 1.24 2.37 100.0 NOP56-219 retained intron lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 834.00 0.99 1.89 100.0 NOP56-219 retained intron lung (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 20522.00 24.32 46.54 72.97 NOP56-219 retained intron lung (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1519.00 16.96 3.44 42.51 RNA5-8SN2-201 rRNA lung (Tissue)