ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 237479.00 99.02 538.55 99.58 MIR22HG-212 lncRNA lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 612.00 1.10 1.39 68.84 SNORD53B-201 snoRNA lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 50981.00 91.73 115.61 95.81 SNORD53B-201 snoRNA lung (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 277.00 0.50 0.63 31.16 SNORD53B-201 snoRNA lung (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 180.00 77.25 0.41 100.0 ENST00000578036 lncRNA lung (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 2911.00 79.12 6.60 100.0 RPL23A-207 protein coding lung (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 1536.00 87.12 3.48 100.0 MIR744-201 miRNA lung (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 76.00 72.38 0.17 100.0 MIR378C-201 miRNA lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 15074.00 61.27 34.18 67.35 MIR142HG-201 lncRNA lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 57.00 0.23 0.13 100.0 MIR142HG-201 lncRNA lung (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 658.00 2.67 1.49 5.97 MIR142HG-201 lncRNA lung (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 1982.00 17.01 4.49 100.0 SNORD3C-201 snoRNA lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 797.28 0.14 1.81 69.75 RPL23A-208 retained intron lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 300.47 0.05 0.68 43.67 RPL23A-208 retained intron lung (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 436674.00 77.27 990.28 87.69 RPL23A-208 retained intron lung (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 121653.00 21.53 275.88 90.18 RPL23A-208 retained intron lung (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 62.00 2.45 0.14 100.0 MIR133A1HG-202 lncRNA lung (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 3565.00 2.31 8.08 35.45 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 13934.00 9.03 31.60 45.51 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 123.00 0.08 0.28 100.0 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 83398.00 54.04 189.13 95.23 RPL17-211 retained intron lung (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 45766.00 29.66 103.79 98.29 RPL17-211 retained intron lung (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 20531.00 51.21 46.56 71.51 ENST00000582320 lncRNA lung (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 6887.00 17.18 15.62 100.0 ENST00000582320 lncRNA lung (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 2673.00 6.67 6.06 100.0 ENST00000582320 lncRNA lung (Tissue)