ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 347.00 0.07 0.79 100.0 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 2302.00 0.45 5.22 100.0 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 418227.00 81.85 948.45 88.39 MT-TE-201 Mt tRNA lung (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 10.00 76.92 0.02 100.0 MIR196A1-201 miRNA lung (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 982.00 10.66 2.23 100.0 MT-RNR1-201 Mt rRNA lung (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2212.00 24.01 5.02 100.0 MT-RNR1-201 Mt rRNA lung (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3155.00 86.63 7.15 100.0 MIR454-201 miRNA lung (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 1505.00 67.46 3.41 100.0 MIR501-201 miRNA lung (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 4016.00 91.40 9.11 100.0 MIR769-201 miRNA lung (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 36.00 61.02 0.08 100.0 KRTAP19-1-201 protein coding lung (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 366.00 42.21 0.83 100.0 MIR708-201 miRNA lung (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 18.00 90.00 0.04 100.0 MIR509-3-201 miRNA lung (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 66.00 51.56 0.15 100.0 MIR543-201 miRNA lung (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 41.00 95.35 0.09 100.0 MIR301B-201 miRNA lung (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1481.00 55.06 3.36 82.55 RNU1-82P-201 snRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 24.00 0.12 0.05 100.0 SNORD66-201 snoRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 5927.00 29.22 13.44 100.0 SNORD66-201 snoRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 6557.00 32.32 14.87 82.74 SNORD66-201 snoRNA lung (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 875.00 4.31 1.98 100.0 SNORD66-201 snoRNA lung (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 223.00 71.25 0.51 100.0 U3.17-201 snoRNA lung (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 20327.00 83.91 46.10 100.0 SNORD17-201 snoRNA lung (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 68.00 11.74 0.15 100.0 SNORD72-201 snoRNA lung (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 3608.00 78.18 8.18 100.0 SNORD70B-201 snoRNA lung (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 12187.00 68.72 27.64 96.95 RNY4P18-201 misc RNA lung (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 1091.00 1.48 2.47 20.03 SNORD90-201 snoRNA lung (Tissue)