ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 4980.00 27.75 9.27 57.47 SNORD117-201 snoRNA metanephros (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 5450.00 30.36 10.14 52.25 SNORD117-201 snoRNA metanephros (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 403.00 2.97 0.75 100.0 SNORD114-3-201 snoRNA metanephros (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 385.00 2.84 0.72 100.0 SNORD114-3-201 snoRNA metanephros (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 11365.00 83.86 21.14 93.86 SNORD114-3-201 snoRNA metanephros (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 19.00 3.16 0.04 100.0 RNA5SP298-201 rRNA pseudogene metanephros (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 251.00 53.18 0.47 100.0 SNORD115-38-201 snoRNA metanephros (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 273.00 47.07 0.51 100.0 SNORD115-10-201 snoRNA metanephros (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 3061.00 81.28 5.69 100.0 SNORD113-9-201 snoRNA metanephros (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 24.00 31.17 0.04 100.0 SNORD115-20-201 snoRNA metanephros (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1275.00 2.77 2.37 100.0 SNORD38A-201 snoRNA metanephros (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 295.00 0.64 0.55 100.0 SNORD38A-201 snoRNA metanephros (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 42676.00 92.76 79.40 100.0 SNORD38A-201 snoRNA metanephros (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 9635.00 87.80 17.93 95.34 SNORD114-20-201 snoRNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 1197.00 1.65 2.23 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 9854.00 13.55 18.33 72.91 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 2078.00 2.86 3.87 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 6095.00 8.38 11.34 72.77 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 1064.00 1.46 1.98 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 402.00 0.55 0.75 52.07 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 106.00 0.15 0.20 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 11027.00 15.16 20.52 82.86 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 11543.00 15.87 21.48 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 931.00 50.41 1.73 100.0 SNORD14C-201 snoRNA metanephros (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 334.00 60.73 0.62 100.0 SNORD115-44-201 snoRNA metanephros (Tissue)