ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 7813.00 79.25 16.54 97.76 MIR30D-201 miRNA occipital lobe (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 1192.00 12.09 2.52 86.94 MIR30D-201 miRNA occipital lobe (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 32524.00 84.65 68.85 100.0 MIR126-201 miRNA occipital lobe (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 4932.00 12.84 10.44 94.0 MIR126-201 miRNA occipital lobe (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 853.00 29.79 1.81 100.0 MIR374A-201 miRNA occipital lobe (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 15.00 78.95 0.03 100.0 MIR31-201 miRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 49.00 0.63 0.10 96.08 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 16.00 0.21 0.03 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 1.00 0.01 0.00 7.69 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 7.00 0.09 0.01 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 10.77 0.14 0.02 51.3 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 5.00 0.06 0.01 83.33 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 18.00 0.23 0.04 69.23 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 12.00 0.16 0.03 80.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 27.00 0.35 0.06 81.82 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 31.06 0.40 0.07 64.72 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 16.36 0.21 0.03 62.93 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 15.00 0.19 0.03 62.5 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 35.69 0.46 0.08 48.9 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 24.00 0.31 0.05 85.71 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 9.00 0.12 0.02 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 137.00 1.77 0.29 99.28 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 856.00 11.09 1.81 99.88 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 48.00 0.62 0.10 100.0 RNA5S12-201 rRNA occipital lobe (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 6789.00 64.13 14.37 100.0 Y_RNA.14-201 misc RNA occipital lobe (Tissue)