ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 199.00 89.64 0.42 100.0 MIR150-201 miRNA occipital lobe (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 13.00 37.14 0.03 100.0 MIR542-201 miRNA occipital lobe (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 39.00 3.86 0.08 100.0 MIR500A-201 miRNA occipital lobe (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 713.00 70.59 1.51 100.0 MIR500A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 3189.00 14.40 6.75 100.0 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 170.00 0.77 0.36 100.0 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 12499.00 56.43 26.46 94.8 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 5253.00 23.71 11.12 88.46 MIR30A-201 miRNA occipital lobe (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 182.00 0.32 0.39 100.0 MIR27B-201 miRNA occipital lobe (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 52893.00 92.28 111.97 94.06 MIR27B-201 miRNA occipital lobe (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 2.00 66.67 0.00 100.0 MIR196A2-201 miRNA occipital lobe (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 112.00 78.87 0.24 100.0 MIR577-201 miRNA occipital lobe (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 3959.00 86.35 8.38 90.31 MIR654-201 miRNA occipital lobe (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 25109.00 92.64 53.15 94.63 MIR204-201 miRNA occipital lobe (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 933.00 93.39 1.98 100.0 MIR152-201 miRNA occipital lobe (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 438.00 50.52 0.93 100.0 MIR138-1-201 miRNA occipital lobe (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 4544.00 92.11 9.62 100.0 MIR30C1-201 miRNA occipital lobe (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 441.00 81.97 0.93 100.0 MIR660-201 miRNA occipital lobe (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 8676.00 1.43 18.37 100.0 MIR125B1-201 miRNA occipital lobe (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 507933.00 83.53 1075.22 95.7 MIR125B1-201 miRNA occipital lobe (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 29.00 37.66 0.06 100.0 MIR493-201 miRNA occipital lobe (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 39.00 50.65 0.08 100.0 MIR493-201 miRNA occipital lobe (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 963.12 33.18 2.04 35.53 MIR182-201 miRNA occipital lobe (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 1878.17 64.70 3.98 73.31 MIR182-201 miRNA occipital lobe (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 637584.00 94.96 1349.67 96.13 MIR100-201 miRNA occipital lobe (Tissue)