ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 6673.00 9.34 14.13 100.0 MIR181C-201 miRNA occipital lobe (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 285.00 75.60 0.60 100.0 MIR194-1-201 miRNA occipital lobe (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 307134.00 86.68 650.16 88.21 MIR128-2-201 miRNA occipital lobe (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 110232.00 84.05 233.35 96.52 MIR99A-201 miRNA occipital lobe (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1048.00 7.28 2.22 74.27 MIR28-201 miRNA occipital lobe (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 11903.00 82.67 25.20 93.76 MIR28-201 miRNA occipital lobe (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 89.00 0.62 0.19 100.0 MIR28-201 miRNA occipital lobe (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 197.00 62.34 0.42 100.0 MIR183-201 miRNA occipital lobe (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 225.00 46.97 0.48 100.0 MIR145-201 miRNA occipital lobe (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 134.00 27.97 0.28 100.0 MIR145-201 miRNA occipital lobe (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 29024.00 96.43 61.44 97.55 MIR186-201 miRNA occipital lobe (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 52.00 92.86 0.11 100.0 MIR200B-201 miRNA occipital lobe (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 805.00 73.32 1.70 100.0 MIR218-1-201 miRNA occipital lobe (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 114187.00 86.65 241.72 92.4 MIR181B2-201 miRNA occipital lobe (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 31.00 48.44 0.07 100.0 MIR495-201 miRNA occipital lobe (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 5369.00 91.25 11.37 91.67 MIR10B-201 miRNA occipital lobe (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 2623.00 33.14 5.55 48.67 MIR130B-201 miRNA occipital lobe (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 2086.00 26.36 4.42 100.0 MIR130B-201 miRNA occipital lobe (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 2975.42 37.60 6.30 61.45 MIR130B-201 miRNA occipital lobe (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 320.00 10.44 0.68 100.0 MIR199A1-201 miRNA occipital lobe (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 667.00 81.04 1.41 100.0 MIR487B-201 miRNA occipital lobe (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 14158.64 55.57 29.97 58.18 MIR93-201 miRNA occipital lobe (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 10014.13 39.30 21.20 52.29 MIR93-201 miRNA occipital lobe (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 765.00 83.42 1.62 92.5 MIR532-201 miRNA occipital lobe (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 1603.00 69.27 3.39 100.0 MIR15B-201 miRNA occipital lobe (Tissue)