ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 4210.00 7.13 6.96 100.0 7SK.1-201 misc RNA uterus (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 2454.00 39.94 4.06 100.0 SNORD14C-201 snoRNA uterus (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 534.00 48.86 0.88 100.0 SNORD115-44-201 snoRNA uterus (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 131.00 8.74 0.22 100.0 RNA5SP77-201 rRNA pseudogene uterus (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 79474.00 59.16 131.47 100.0 SNORD114-22-201 snoRNA uterus (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 50245.00 37.40 83.12 99.65 SNORD114-22-201 snoRNA uterus (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1230.00 4.54 2.03 100.0 SNORD6-201 snoRNA uterus (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 22626.00 83.45 37.43 100.0 SNORD6-201 snoRNA uterus (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 1334.00 9.08 2.21 100.0 RNY3-201 misc RNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 78783.00 56.55 130.33 97.48 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 458.00 0.33 0.76 100.0 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 10903.00 7.83 18.04 89.81 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 11772.47 8.45 19.48 36.97 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 19626.97 14.09 32.47 61.63 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 794.00 0.57 1.31 100.0 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1482.00 1.06 2.45 100.0 SNORD82-201 snoRNA uterus (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 162789.00 93.23 269.30 95.0 MIR146B-201 miRNA uterus (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 768.00 60.62 1.27 100.0 SNHG20-201 lncRNA uterus (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 39.00 3.41 0.06 100.0 ATP5MK-205 protein coding uterus (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 393.00 34.32 0.65 100.0 ATP5MK-205 protein coding uterus (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 27.00 52.94 0.04 100.0 ATAD3A-202 protein coding uterus (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 15891.00 56.48 26.29 74.44 TMC5-202 protein coding uterus (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 73.00 33.95 0.12 100.0 ZMYM2-203 protein coding uterus (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 4783.00 18.30 7.91 100.0 RNVU1-7-201 snRNA uterus (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 3870.00 38.71 6.40 100.0 SNORD24-201 snoRNA uterus (Tissue)