ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 198.00 55.31 0.33 100.0 SNORD115-32-201 snoRNA uterus (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 223.00 37.80 0.37 100.0 SNORD115-30-201 snoRNA uterus (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 327.00 1.75 0.54 100.0 RNY1-201 misc RNA uterus (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 3078.00 16.44 5.09 100.0 RNY1-201 misc RNA uterus (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1223.00 6.53 2.02 100.0 RNY1-201 misc RNA uterus (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 2996.74 16.01 4.96 65.55 RNY1-201 misc RNA uterus (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1295.80 6.92 2.14 40.32 RNY1-201 misc RNA uterus (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 211.00 26.98 0.35 100.0 SNORD115-42-201 snoRNA uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 778.00 2.83 1.29 100.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1576.94 5.74 2.61 40.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 314.32 1.14 0.52 24.81 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 260.00 0.95 0.43 100.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 856.72 3.12 1.42 66.67 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 1736.00 6.32 2.87 100.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 138.00 0.50 0.23 100.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 53.00 0.19 0.09 100.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 392.00 1.43 0.65 100.0 RNA5SP202-201 rRNA pseudogene uterus (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 26152.00 71.83 43.26 100.0 SNORD114-9-201 snoRNA uterus (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 6592.00 18.11 10.91 100.0 SNORD114-9-201 snoRNA uterus (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 668.00 3.38 1.11 100.0 Y_RNA.234-201 misc RNA uterus (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 5.00 0.02 0.01 100.0 RNA5S9-201 rRNA uterus (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 127.00 58.53 0.21 100.0 SNORD115-23-201 snoRNA uterus (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 789.00 8.14 1.31 100.0 RNA5SP141-201 rRNA pseudogene uterus (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 1332.00 67.82 2.20 100.0 SNORD114-15-201 snoRNA uterus (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1824.00 55.81 3.02 100.0 ENST00000364722 snoRNA uterus (Tissue)