ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 1.00 1.12 0.00 100.0 Y_RNA.14-201 misc RNA uterus (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 256.00 30.59 0.42 100.0 SNORD115-34-201 snoRNA uterus (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 1703.00 43.49 2.82 100.0 RNU5E-1-201 snRNA uterus (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 348.00 2.60 0.58 80.93 RNA5SP370-201 rRNA pseudogene uterus (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 1000.00 34.05 1.65 100.0 SNORA31-201 snoRNA uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 345.00 2.58 0.57 80.61 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 72.00 0.54 0.12 100.0 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 702.00 5.25 1.16 59.64 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 18.00 0.13 0.03 100.0 RNA5SP389-201 rRNA pseudogene uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 902.00 1.19 1.49 100.0 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 7783.00 10.27 12.88 75.06 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 6473.58 8.54 10.71 34.99 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 3627.00 4.79 6.00 76.29 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 4071.00 5.37 6.73 71.85 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2415.00 3.19 4.00 54.79 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 373.00 0.49 0.62 100.0 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 989.00 1.30 1.64 34.9 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 3385.00 4.47 5.60 44.1 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1175.51 1.55 1.94 55.5 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 4201.00 5.54 6.95 59.34 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 990.00 1.31 1.64 100.0 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 12620.92 16.65 20.88 70.78 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1001.93 1.32 1.66 35.62 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 2545.00 3.36 4.21 87.07 RNU5A-1-201 snRNA uterus (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 7698.00 77.84 12.73 100.0 SNORD114-14-201 snoRNA uterus (Tissue)