ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 984.00 0.46 1.63 100.0 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 2517.00 1.18 4.16 100.0 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 152209.00 71.66 251.80 86.52 MT-TE-201 Mt tRNA uterus (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 3885.00 52.79 6.43 100.0 MIR196A1-201 miRNA uterus (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 895.00 10.89 1.48 100.0 MT-RNR1-201 Mt rRNA uterus (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1263.00 15.36 2.09 100.0 MT-RNR1-201 Mt rRNA uterus (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 6408.00 85.14 10.60 100.0 MIR454-201 miRNA uterus (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 167.00 19.46 0.28 100.0 MIR501-201 miRNA uterus (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 4558.00 93.06 7.54 100.0 MIR769-201 miRNA uterus (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 63.00 52.07 0.10 100.0 KRTAP19-1-201 protein coding uterus (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1399.00 48.16 2.31 100.0 MIR708-201 miRNA uterus (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 3526.00 84.56 5.83 100.0 MIR509-3-201 miRNA uterus (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 291.00 57.40 0.48 100.0 MIR543-201 miRNA uterus (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 88.00 90.72 0.15 100.0 MIR301B-201 miRNA uterus (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 12997.00 59.70 21.50 73.1 RNU1-82P-201 snRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 17.00 0.10 0.03 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 5187.00 29.58 8.58 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4409.00 25.15 7.29 78.38 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 938.00 5.35 1.55 100.0 SNORD66-201 snoRNA uterus (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 371.00 55.37 0.61 100.0 U3.17-201 snoRNA uterus (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 7809.00 56.12 12.92 100.0 SNORD17-201 snoRNA uterus (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 9.00 6.47 0.01 100.0 SNORD72-201 snoRNA uterus (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 7762.00 73.99 12.84 100.0 SNORD70B-201 snoRNA uterus (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 7972.00 60.73 13.19 96.15 RNY4P18-201 misc RNA uterus (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 264.00 0.86 0.44 15.86 SNORD90-201 snoRNA uterus (Tissue)