ENCFF001RMD

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 23765.00 84.69 39.31 93.07 MIR130A-201 miRNA uterus (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 3767.00 13.42 6.23 27.07 MIR130A-201 miRNA uterus (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 449110.00 97.53 742.97 98.91 MIRLET7F2-201 miRNA uterus (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 641.00 66.56 1.06 100.0 MIR652-201 miRNA uterus (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 6.00 85.71 0.01 100.0 MIR653-201 miRNA uterus (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 5313.00 75.92 8.79 100.0 MIR140-201 miRNA uterus (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 591.00 7.37 0.98 100.0 MIR106B-201 miRNA uterus (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 3172.00 39.54 5.25 76.25 MIR106B-201 miRNA uterus (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 50840.00 33.31 84.11 95.3 SNORD83A-201 snoRNA uterus (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 91418.00 59.89 151.23 97.58 SNORD83A-201 snoRNA uterus (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4409.00 75.06 7.29 100.0 SNORD41-201 snoRNA uterus (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 22.00 0.64 0.04 100.0 MT-TF-201 Mt tRNA uterus (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 39.00 1.14 0.06 61.9 MT-TF-201 Mt tRNA uterus (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 878.00 25.60 1.45 74.03 MT-TF-201 Mt tRNA uterus (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1934.00 27.51 3.20 100.0 MT-TV-201 Mt tRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 28.00 0.07 0.05 100.0 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 6823.00 17.34 11.29 86.52 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 3967.00 10.08 6.56 100.0 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 115.00 0.29 0.19 100.0 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 6553.00 16.65 10.84 84.24 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 384.00 0.98 0.64 100.0 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 1.00 0.00 0.00 100.0 MT-RNR2-201 Mt rRNA uterus (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 6548.00 26.14 10.83 85.92 MT-TI-201 Mt tRNA uterus (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 7228.00 28.85 11.96 100.0 MT-TI-201 Mt tRNA uterus (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2071.92 10.49 3.43 60.37 MT-TQ-201 Mt tRNA uterus (Tissue)