ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 3571.40 3.37 7.31 25.16 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 5627.00 5.32 11.52 100.0 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 23985.00 22.66 49.09 100.0 RNY1-201 misc RNA temporal lobe (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 17196.00 19.68 35.20 100.0 SNORD115-42-201 snoRNA temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 402.00 3.73 0.82 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 2.00 0.02 0.00 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 1418.18 13.16 2.90 45.28 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 235.00 2.18 0.48 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 32.00 0.30 0.07 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 39.99 0.37 0.08 26.14 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1.00 0.01 0.00 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 50.00 0.46 0.10 100.0 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 94.52 0.88 0.19 63.44 RNA5SP202-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 6496.00 36.93 13.30 100.0 SNORD114-9-201 snoRNA temporal lobe (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 7866.00 44.72 16.10 100.0 SNORD114-9-201 snoRNA temporal lobe (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1133.00 2.04 2.32 100.0 Y_RNA.234-201 misc RNA temporal lobe (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 5532.00 38.33 11.32 100.0 SNORD115-23-201 snoRNA temporal lobe (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 5.00 0.13 0.01 100.0 RNA5SP141-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 390.00 39.76 0.80 100.0 SNORD114-15-201 snoRNA temporal lobe (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1065.00 35.62 2.18 100.0 ENST00000364722 snoRNA temporal lobe (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 20902.00 22.66 42.78 100.0 SNORD115-15-201 snoRNA temporal lobe (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 272.00 18.92 0.56 100.0 SNORD113-3-201 snoRNA temporal lobe (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 17288.00 59.66 35.38 100.0 SNORD52-201 snoRNA temporal lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 2514.00 15.12 5.15 30.98 SNORD117-201 snoRNA temporal lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 5601.00 33.68 11.46 77.1 SNORD117-201 snoRNA temporal lobe (Tissue)