ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 4341.00 40.70 8.88 99.54 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1534.00 85.17 3.14 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 42.00 0.04 0.09 48.28 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 45.00 0.04 0.09 51.72 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 67099.00 59.61 137.33 75.82 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 55328.96 62.32 113.24 73.26 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 20903.51 23.54 42.78 35.56 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 2408.00 2.71 4.93 63.22 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 156127.00 93.74 319.55 99.23 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 1554.00 11.97 3.18 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 2678.00 34.87 5.48 89.9 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 94.00 0.01 0.19 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 456.00 0.03 0.93 64.59 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 964.00 38.16 1.97 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 303.00 6.97 0.62 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1990984.00 97.77 4075.03 99.67 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 693.00 2.05 1.42 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 12094.00 35.74 24.75 69.74 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 3157.00 28.16 6.46 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 3878.00 66.42 7.94 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 1791.00 29.03 3.67 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 233903.00 94.35 478.74 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 10541.00 97.14 21.57 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 2573.00 23.68 5.27 91.66 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 96.00 0.88 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA temporal lobe (Tissue)