ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 510.00 1.70 1.04 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 6329.00 21.11 12.95 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 4066.00 13.56 8.32 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 5.00 0.02 0.01 71.43 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 235.00 0.02 0.48 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 963.00 25.82 1.97 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 12509.00 69.54 25.60 87.95 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 63.00 0.35 0.13 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 1714.00 9.53 3.51 12.05 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1046.00 19.06 2.14 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 4.00 0.07 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 940.00 40.57 1.92 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 2691.00 77.08 5.51 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 185.00 16.05 0.38 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 33.00 0.29 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 10.00 0.09 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 16.00 0.14 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 154.00 1.36 0.32 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 169.00 1.50 0.35 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 17.00 0.15 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1266.00 0.10 2.59 52.38 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 3161.00 0.24 6.47 66.87 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 2215.00 0.17 4.53 97.36 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 3033.00 8.53 6.21 19.94 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4442.00 96.67 9.09 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA temporal lobe (Tissue)