ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 4927.32 3.22 10.08 40.69 ENST00000823279 lncRNA temporal lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 5133.12 3.36 10.51 42.89 ENST00000823279 lncRNA temporal lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 10160.00 6.64 20.79 78.58 ENST00000823279 lncRNA temporal lobe (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 17190.72 11.24 35.19 49.66 ENST00000823279 lncRNA temporal lobe (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 12605.49 8.24 25.80 36.97 ENST00000823801 lncRNA temporal lobe (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 221.00 34.80 0.45 40.85 ENST00000827714 lncRNA temporal lobe (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 320.00 50.39 0.65 59.15 ENST00000827714 lncRNA temporal lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 2211.00 5.54 4.53 100.0 GAS5-377 lncRNA temporal lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 859.00 2.15 1.76 100.0 GAS5-377 lncRNA temporal lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1387.00 3.47 2.84 100.0 GAS5-377 lncRNA temporal lobe (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 31479.00 78.84 64.43 100.0 GAS5-377 lncRNA temporal lobe (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 23.00 88.46 0.05 100.0 MIR205HG-245 lncRNA temporal lobe (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 2786.00 29.70 5.70 100.0 TAF12-DT-204 lncRNA temporal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 340481.00 90.59 696.88 99.31 ZFAS1-238 lncRNA temporal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 2175.00 0.58 4.45 100.0 ZFAS1-238 lncRNA temporal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 7636.00 2.03 15.63 100.0 ZFAS1-238 lncRNA temporal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2828.00 0.75 5.79 100.0 ZFAS1-238 lncRNA temporal lobe (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 7410.00 6.78 15.17 100.0 ZFAS1-242 lncRNA temporal lobe (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 93110.00 85.17 190.57 100.0 ZFAS1-242 lncRNA temporal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 410.00 41.71 0.84 100.0 ENST00000837997 lncRNA temporal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 225.00 22.89 0.46 100.0 ENST00000837997 lncRNA temporal lobe (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 14633.00 71.66 29.95 81.23 ENST00000839036 lncRNA temporal lobe (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 35.00 14.46 0.07 100.0 ENST00000849527 lncRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 15098.00 10.43 30.90 11.87 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA temporal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 1289.00 0.06 2.64 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA temporal lobe (Tissue)