ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 10694.00 5.54 21.89 100.0 SNHG14-306 lncRNA temporal lobe (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 15.00 0.05 0.03 100.0 ENST00000666735 lncRNA temporal lobe (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 18559.00 60.58 37.99 100.0 ENST00000666735 lncRNA temporal lobe (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 9031.00 74.64 18.48 100.0 MEG8-242 lncRNA temporal lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 23896.48 26.69 48.91 37.71 SNHG14-312 lncRNA temporal lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 41709.93 46.58 85.37 65.82 SNHG14-312 lncRNA temporal lobe (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 4043.00 4.52 8.27 100.0 SNHG14-312 lncRNA temporal lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 291.00 0.50 0.60 100.0 MEG8-244 lncRNA temporal lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 625.00 1.07 1.28 100.0 MEG8-244 lncRNA temporal lobe (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 55717.00 95.29 114.04 99.94 MEG8-244 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 575.00 0.03 1.18 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 8188.00 0.36 16.76 99.61 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 501.29 0.02 1.03 45.08 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 9121.00 0.41 18.67 75.46 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1148747.00 51.02 2351.19 97.78 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 2841.00 0.13 5.81 67.92 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 184257.00 8.18 377.13 99.21 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 11169.00 0.50 22.86 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 53008.00 2.35 108.49 97.26 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 260.00 0.01 0.53 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 1881.00 0.08 3.85 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 2489.00 0.11 5.09 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 4393.00 0.20 8.99 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 373.00 0.02 0.76 100.0 SNHG1-248 lncRNA temporal lobe (Tissue)