ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 12561.00 89.10 25.71 100.0 MEG8-225 lncRNA temporal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 306180.00 80.09 626.67 100.0 SNHG29-232 lncRNA temporal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 300.00 0.08 0.61 100.0 SNHG29-232 lncRNA temporal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 1100.00 0.29 2.25 100.0 SNHG29-232 lncRNA temporal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 10333.00 2.70 21.15 100.0 SNHG29-232 lncRNA temporal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 11570.00 3.03 23.68 100.0 SNHG29-232 lncRNA temporal lobe (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 36090.00 9.44 73.87 100.0 SNHG29-232 lncRNA temporal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 844.00 0.17 1.73 100.0 SNHG14-234 lncRNA temporal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 198726.00 40.10 406.74 96.47 SNHG14-234 lncRNA temporal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 2848.00 0.57 5.83 100.0 SNHG14-234 lncRNA temporal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 22989.00 4.64 47.05 100.0 SNHG14-234 lncRNA temporal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 87075.00 17.57 178.22 100.0 SNHG14-234 lncRNA temporal lobe (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 37139.00 7.49 76.01 97.24 SNHG14-234 lncRNA temporal lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 2426.00 3.83 4.97 61.09 ENST00000655317 lncRNA temporal lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 12419.00 19.61 25.42 100.0 ENST00000655317 lncRNA temporal lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2667.00 4.21 5.46 48.97 ENST00000655317 lncRNA temporal lobe (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 4146.00 6.55 8.49 100.0 ENST00000655317 lncRNA temporal lobe (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 32042.00 42.76 65.58 98.45 LINC01962-202 lncRNA temporal lobe (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 37785.00 50.43 77.34 100.0 LINC01962-202 lncRNA temporal lobe (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 524.00 0.70 1.07 100.0 LINC01962-202 lncRNA temporal lobe (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 60768.00 27.41 124.38 96.93 SNHG14-241 lncRNA temporal lobe (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 51735.00 95.41 105.89 100.0 MEG8-228 lncRNA temporal lobe (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 10527.00 19.39 21.55 100.0 SNHG14-254 lncRNA temporal lobe (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 14699.00 20.75 30.09 100.0 SNHG14-261 lncRNA temporal lobe (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 22478.00 31.72 46.01 90.63 SNHG14-261 lncRNA temporal lobe (Tissue)