ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 3135.00 88.94 6.42 100.0 DNM3OS-205 lncRNA temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1282.00 0.09 2.62 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 184.00 0.01 0.38 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 3861.00 0.26 7.90 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 1881.00 0.13 3.85 74.61 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 7333.00 0.50 15.01 93.24 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 33.00 0.00 0.07 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 876.00 0.06 1.79 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 494.00 0.03 1.01 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1017322.00 69.58 2082.20 99.78 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2500.00 0.17 5.12 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 2585.00 0.18 5.29 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1289.00 0.09 2.64 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1044.00 0.07 2.14 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 564.00 0.04 1.15 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 831.00 0.06 1.70 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 753.00 0.05 1.54 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 8988.00 0.61 18.40 81.15 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 9287.00 0.64 19.01 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 36442.00 2.49 74.59 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 68611.00 4.69 140.43 96.92 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 205421.00 14.05 420.44 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 520.00 0.04 1.06 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 4537.00 0.31 9.29 100.0 GAS5-230 retained intron temporal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 16044.00 1.10 32.84 100.0 GAS5-230 retained intron temporal lobe (Tissue)