ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 141.00 9.07 0.29 100.0 SCARNA4-202 scaRNA temporal lobe (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 3995.00 74.00 8.18 100.0 ENST00000625572 miRNA temporal lobe (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 22047.00 90.42 45.12 100.0 ENST00000628177 snoRNA temporal lobe (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2499.00 81.06 5.11 100.0 ENST00000630615 snoRNA temporal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 99.00 17.87 0.20 100.0 DMRT2-209 protein coding temporal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 111.00 20.04 0.23 100.0 DMRT2-209 protein coding temporal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 713.00 5.57 1.46 100.0 SNORD98-201 snoRNA temporal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 5767.00 45.08 11.80 100.0 SNORD98-201 snoRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 246753.97 42.52 505.04 45.31 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 276.09 0.05 0.57 16.97 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 234.00 0.04 0.48 100.0 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1220.91 0.21 2.50 75.04 MIR106AHG-201 lncRNA temporal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 467.00 6.25 0.96 100.0 MEG8-222 lncRNA temporal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 3595.00 48.10 7.36 100.0 MEG8-222 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 39010.00 9.32 79.84 95.37 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 176152.00 42.09 360.54 89.79 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 24695.00 5.90 50.54 100.0 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 924.00 0.22 1.89 81.84 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 684.00 0.16 1.40 100.0 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 9599.00 2.29 19.65 43.31 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 57430.00 13.72 117.54 76.67 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 32893.00 7.86 67.32 61.67 SNHG14-224 lncRNA temporal lobe (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1825.71 32.28 3.74 72.31 5S_rRNA.20-201 rRNA pseudogene temporal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 354.00 4.13 0.72 100.0 HSPA9-211 retained intron temporal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1509.00 17.59 3.09 40.04 HSPA9-211 retained intron temporal lobe (Tissue)