ENCFF001RMC

Library Details

Organism: Homo Sapiens
Biosample: temporal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGD
Description: Part of ENCODE experiment ENCSR000AGD. The libraries contained in this experiment come from human fetal temporal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 994.00 75.19 2.03 100.0 MIR652-201 miRNA temporal lobe (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 2.00 100.00 0.00 100.0 MIR653-201 miRNA temporal lobe (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2279.00 55.71 4.66 100.0 MIR140-201 miRNA temporal lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 1752.00 19.67 3.59 100.0 MIR106B-201 miRNA temporal lobe (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1798.00 20.19 3.68 71.66 MIR106B-201 miRNA temporal lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 48887.00 70.15 100.06 98.47 SNORD83A-201 snoRNA temporal lobe (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 14225.00 20.41 29.11 95.0 SNORD83A-201 snoRNA temporal lobe (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 393.00 59.01 0.80 100.0 SNORD41-201 snoRNA temporal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 75.00 1.12 0.15 75.76 MT-TF-201 Mt tRNA temporal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 16.00 0.24 0.03 100.0 MT-TF-201 Mt tRNA temporal lobe (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 595.00 8.92 1.22 72.12 MT-TF-201 Mt tRNA temporal lobe (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1129.00 11.32 2.31 100.0 MT-TV-201 Mt tRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 7.00 0.02 0.01 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 44.00 0.12 0.09 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 1716.00 4.86 3.51 80.6 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 176.00 0.50 0.36 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 1804.00 5.11 3.69 93.71 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 2666.00 7.56 5.46 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 60.00 0.17 0.12 100.0 MT-RNR2-201 Mt rRNA temporal lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 2890.00 15.31 5.92 84.18 MT-TI-201 Mt tRNA temporal lobe (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 4547.00 24.10 9.31 100.0 MT-TI-201 Mt tRNA temporal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 4561.52 22.91 9.34 69.58 MT-TQ-201 Mt tRNA temporal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 49.00 0.25 0.10 100.0 MT-TQ-201 Mt tRNA temporal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 5354.00 26.90 10.96 88.38 MT-TQ-201 Mt tRNA temporal lobe (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 1720.34 8.64 3.52 60.05 MT-TQ-201 Mt tRNA temporal lobe (Tissue)