ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 33.00 3.01 0.11 100.0 RNA5SP77-201 rRNA pseudogene skeletal muscle tissue (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 237761.00 32.09 767.39 100.0 SNORD114-22-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 462262.00 62.39 1491.98 96.77 SNORD114-22-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1699.00 6.56 5.48 100.0 SNORD6-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 22028.00 85.06 71.10 100.0 SNORD6-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 418.00 4.76 1.35 100.0 RNY3-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 7328.77 9.07 23.65 55.5 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 560.00 0.69 1.81 100.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 605.00 0.75 1.95 100.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 4395.00 5.44 14.19 89.66 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 364.00 0.45 1.17 100.0 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 54890.00 67.91 177.16 98.37 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 5686.59 7.04 18.35 43.06 SNORD82-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 19735.00 92.67 63.70 94.57 MIR146B-201 miRNA skeletal muscle tissue (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 78.00 30.83 0.25 100.0 SNHG20-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 233.00 7.56 0.75 100.0 ATP5MK-205 protein coding skeletal muscle tissue (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 1450.00 47.03 4.68 100.0 ATP5MK-205 protein coding skeletal muscle tissue (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 120.00 31.91 0.39 100.0 LINC01556-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 42.00 45.65 0.14 100.0 ATAD3A-202 protein coding skeletal muscle tissue (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 5470.00 50.65 17.65 72.91 TMC5-202 protein coding skeletal muscle tissue (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 41.00 71.93 0.13 100.0 ZMYM2-203 protein coding skeletal muscle tissue (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 588.00 7.18 1.90 100.0 RNVU1-7-201 snRNA skeletal muscle tissue (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1239.00 28.91 4.00 100.0 SNORD24-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 473.00 68.55 1.53 100.0 Y_RNA.389-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 377.00 1.01 1.22 100.0 SNORD101-201 snoRNA skeletal muscle tissue (Tissue)