ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 53.00 0.47 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 13.00 0.11 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 154.00 1.36 0.50 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 351.00 3.09 1.13 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 29.00 0.26 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 676.00 5.96 2.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 23481.00 0.85 75.79 94.84 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 3208.00 0.12 10.35 69.39 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1939.00 0.07 6.26 66.59 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1382.00 20.42 4.46 55.28 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 1705.00 90.07 5.50 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 872.00 25.71 2.81 80.15 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 329.00 84.79 1.06 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 1216.00 0.61 3.92 75.06 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 404.00 0.20 1.30 24.94 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 118845.00 60.09 383.58 80.79 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 8850.87 24.19 28.57 37.97 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1010.00 2.76 3.26 62.04 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 22236.74 60.76 71.77 75.05 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 242919.00 83.20 784.04 89.86 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 328.00 2.88 1.06 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 5576.00 29.20 18.00 90.74 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 55.00 0.02 0.18 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 437.00 0.09 1.41 62.16 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 71.00 5.26 0.23 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA skeletal muscle tissue (Tissue)