ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 2323.00 8.14 7.50 100.0 MEG9-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 339.00 12.39 1.09 100.0 DNAJC5-203 nonsense mediated decay skeletal muscle tissue (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 1432.00 17.85 4.62 100.0 ENST00000707189 TEC skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 37.00 0.01 0.12 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 185768.10 53.82 599.58 59.16 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 146.00 0.04 0.47 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 1139.00 0.33 3.68 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 148318.54 42.97 478.71 46.95 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 12442.00 3.60 40.16 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 105.00 0.03 0.34 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 2033.00 0.59 6.56 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 1630.00 0.47 5.26 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 4860.00 1.98 15.69 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1948.00 0.80 6.29 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 340.00 0.14 1.10 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 1638.00 0.67 5.29 48.95 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 230258.00 94.03 743.17 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 41725.00 73.03 134.67 98.04 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 6876.00 12.03 22.19 100.0 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 961.00 1.68 3.10 100.0 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1455.00 2.55 4.70 100.0 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 186.00 75.00 0.60 100.0 B4GALT1-203 nonsense mediated decay skeletal muscle tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1603.00 2.20 5.17 100.0 ENST00000722183 lncRNA skeletal muscle tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 40794.00 55.99 131.67 85.07 ENST00000722183 lncRNA skeletal muscle tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 6805.00 9.34 21.96 100.0 ENST00000722183 lncRNA skeletal muscle tissue (Tissue)