ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 3255.00 5.48 10.51 79.2 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1624.00 2.73 5.24 52.93 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1703.08 17.74 5.50 62.64 5S_rRNA.20-201 rRNA pseudogene skeletal muscle tissue (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 414.00 3.84 1.34 100.0 HSPA9-211 retained intron skeletal muscle tissue (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1786.00 16.58 5.76 30.35 HSPA9-211 retained intron skeletal muscle tissue (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 209436.00 80.08 675.97 100.0 DNM3OS-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 28220.00 3.28 91.08 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 91.00 0.01 0.29 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2706.00 0.31 8.73 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 1175.00 0.14 3.79 69.16 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 11713.00 1.36 37.80 94.19 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 144.00 0.02 0.46 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 176.00 0.02 0.57 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 396.00 0.05 1.28 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 639871.00 74.30 2065.23 99.81 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1073.00 0.12 3.46 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 2688.00 0.31 8.68 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1073.00 0.12 3.46 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 527.00 0.06 1.70 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 2494.00 0.29 8.05 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 612.00 0.07 1.98 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 449.00 0.05 1.45 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 749.00 0.09 2.42 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 11575.00 1.34 37.36 84.3 GAS5-230 retained intron skeletal muscle tissue (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 22061.00 2.56 71.20 100.0 GAS5-230 retained intron skeletal muscle tissue (Tissue)