ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 21411.04 10.08 69.11 37.85 U2.3-201 snRNA skeletal muscle tissue (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 16531.76 7.78 53.36 50.4 U2.3-201 snRNA skeletal muscle tissue (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1478.00 0.73 4.77 100.0 U2.6-201 snRNA skeletal muscle tissue (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 3052.00 0.85 9.85 57.5 ENST00000619323 lncRNA skeletal muscle tissue (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 350782.00 97.48 1132.17 99.08 ENST00000619323 lncRNA skeletal muscle tissue (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 84.00 10.49 0.27 100.0 SCARNA4-202 scaRNA skeletal muscle tissue (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 655.00 76.52 2.11 100.0 ENST00000625572 miRNA skeletal muscle tissue (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 16833.00 92.52 54.33 100.0 ENST00000628177 snoRNA skeletal muscle tissue (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 6347.00 92.23 20.49 100.0 ENST00000630615 snoRNA skeletal muscle tissue (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 610.00 70.68 1.97 100.0 DMRT2-209 protein coding skeletal muscle tissue (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 23.00 2.67 0.07 100.0 DMRT2-209 protein coding skeletal muscle tissue (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 821.00 19.42 2.65 100.0 SNORD98-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 2556.00 60.45 8.25 100.0 SNORD98-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 124315.32 39.75 401.24 43.68 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 1705.03 0.55 5.50 37.97 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 286.00 0.09 0.92 100.0 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 2682.08 0.86 8.66 59.72 MIR106AHG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 5239.00 15.76 16.91 100.0 MEG8-222 lncRNA skeletal muscle tissue (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 11363.00 34.18 36.67 100.0 MEG8-222 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 4092.00 6.89 13.21 95.43 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 29472.00 49.62 95.12 89.42 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 4942.00 8.32 15.95 100.0 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 1550.00 2.61 5.00 87.72 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 108.00 0.18 0.35 100.0 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1414.00 2.38 4.56 43.86 SNHG14-224 lncRNA skeletal muscle tissue (Tissue)