ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 511390.09 79.33 1650.55 85.32 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 130938.00 20.31 422.61 20.6 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 1641.00 0.25 5.30 89.53 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 82.00 0.01 0.26 100.0 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 14.00 0.00 0.05 100.0 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 334.00 90.27 1.08 100.0 ENST00000597420 lncRNA skeletal muscle tissue (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 31.00 1.28 0.10 100.0 RPS11-206 retained intron skeletal muscle tissue (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 2065.00 85.26 6.66 100.0 RPS11-206 retained intron skeletal muscle tissue (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 131074.00 51.42 423.05 54.07 CARMN-209 lncRNA skeletal muscle tissue (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1181.00 27.76 3.81 100.0 ENST00000602478 lncRNA skeletal muscle tissue (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 7.00 30.43 0.02 100.0 PPFIA1P1-201 processed pseudogene skeletal muscle tissue (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 83287.00 69.68 268.81 100.0 SNORD114-21-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 15422.00 12.90 49.78 100.0 SNORD114-21-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 287.00 20.49 0.93 100.0 SNORD115-40-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 42585.00 98.73 137.45 100.0 MIR98-201 miRNA skeletal muscle tissue (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 443806.00 96.80 1432.41 100.0 SNORD113-5-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 5171.00 95.04 16.69 100.0 MIR15A-201 miRNA skeletal muscle tissue (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 18560.00 87.49 59.90 100.0 MIR376C-201 miRNA skeletal muscle tissue (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 4132.00 57.77 13.34 100.0 SNHG21-206 retained intron skeletal muscle tissue (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 73.00 11.61 0.24 100.0 SNORD11B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1847.00 60.18 5.96 100.0 SNORD91B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 1.00 4.55 0.00 100.0 MIR219A2HG-201 lncRNA skeletal muscle tissue (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 12134.00 54.63 39.16 69.05 SNORD91A-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 209966.00 47.83 677.68 97.95 MIR486-1-201 miRNA skeletal muscle tissue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 9481.00 11.78 30.60 72.91 NOP56-219 retained intron skeletal muscle tissue (Tissue)