ENCFF001RMB

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 299.00 0.11 0.97 100.0 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 75.00 0.03 0.24 100.0 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 236175.00 86.92 762.27 93.12 MT-TE-201 Mt tRNA skeletal muscle tissue (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 3979.00 59.55 12.84 100.0 MIR196A1-201 miRNA skeletal muscle tissue (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 142.00 4.69 0.46 100.0 MT-RNR1-201 Mt rRNA skeletal muscle tissue (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 273.00 9.01 0.88 100.0 MT-RNR1-201 Mt rRNA skeletal muscle tissue (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3274.00 81.56 10.57 100.0 MIR454-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 5166.00 48.11 16.67 100.0 MIR501-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 4503.00 89.84 14.53 100.0 MIR769-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 68.00 65.38 0.22 100.0 KRTAP19-1-201 protein coding skeletal muscle tissue (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1580.00 44.77 5.10 100.0 MIR708-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 141.00 84.43 0.46 100.0 MIR509-3-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 11450.00 74.62 36.96 100.0 MIR543-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 545.00 95.78 1.76 100.0 MIR301B-201 miRNA skeletal muscle tissue (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1506.00 32.68 4.86 71.92 RNU1-82P-201 snRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 58.00 0.33 0.19 100.0 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 6179.00 34.78 19.94 100.0 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3919.00 22.06 12.65 79.32 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 815.00 4.59 2.63 100.0 SNORD66-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1558.00 80.10 5.03 100.0 U3.17-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 4694.00 78.05 15.15 100.0 SNORD17-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 273.00 68.42 0.88 100.0 SNORD72-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2412.00 76.60 7.78 100.0 SNORD70B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 4026.00 48.03 12.99 95.11 RNY4P18-201 misc RNA skeletal muscle tissue (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 517.00 0.86 1.67 16.24 SNORD90-201 snoRNA skeletal muscle tissue (Tissue)