ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 1043.00 24.79 2.57 100.0 SNORD113-3-201 snoRNA skin of body (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 23390.00 59.89 57.62 100.0 SNORD52-201 snoRNA skin of body (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 3269.00 19.26 8.05 31.84 SNORD117-201 snoRNA skin of body (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 6998.00 41.23 17.24 75.88 SNORD117-201 snoRNA skin of body (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 3129.00 4.54 7.71 100.0 SNORD114-3-201 snoRNA skin of body (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2442.00 3.54 6.02 100.0 SNORD114-3-201 snoRNA skin of body (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 55371.00 80.34 136.40 93.98 SNORD114-3-201 snoRNA skin of body (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 15.00 1.09 0.04 100.0 RNA5SP298-201 rRNA pseudogene skin of body (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 56.00 36.84 0.14 100.0 SNORD115-38-201 snoRNA skin of body (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 42.00 29.79 0.10 100.0 SNORD115-10-201 snoRNA skin of body (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 24481.00 79.83 60.31 100.0 SNORD113-9-201 snoRNA skin of body (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 3.00 37.50 0.01 100.0 SNORD115-20-201 snoRNA skin of body (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 26633.00 89.45 65.61 100.0 SNORD38A-201 snoRNA skin of body (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 211.00 0.71 0.52 100.0 SNORD38A-201 snoRNA skin of body (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 982.00 3.30 2.42 100.0 SNORD38A-201 snoRNA skin of body (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 67251.00 90.03 165.67 95.75 SNORD114-20-201 snoRNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 917.00 11.29 2.26 100.0 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 372.00 4.58 0.92 72.23 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 104.00 1.28 0.26 100.0 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 916.00 11.28 2.26 100.0 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 245.00 3.02 0.60 100.0 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 254.00 3.13 0.63 78.64 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 14.00 0.17 0.03 100.0 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 928.00 11.43 2.29 89.66 7SK.1-201 misc RNA skin of body (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 556.00 6.85 1.37 79.54 7SK.1-201 misc RNA skin of body (Tissue)