ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 3154.00 8.71 7.77 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 6940.00 22.50 17.10 42.01 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 504.00 1.56 1.24 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 1529.00 27.08 3.77 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 238.00 4.21 0.59 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 1610.00 28.51 3.97 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2.00 0.04 0.00 50.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 376.00 0.02 0.93 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 2457.00 27.65 6.05 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1519.00 19.47 3.74 29.37 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 307.00 3.93 0.76 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 3653.00 46.82 9.00 70.63 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1364.00 18.71 3.36 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 8.00 0.11 0.02 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1622.00 66.20 4.00 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1943.00 69.97 4.79 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 554.00 21.91 1.36 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 262.00 1.21 0.65 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 5.00 0.02 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 191.00 0.88 0.47 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 106.00 0.49 0.26 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 68.00 0.31 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 346.00 1.59 0.85 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 44565.00 2.92 109.78 96.32 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 2283.00 0.15 5.62 66.31 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skin of body (Tissue)