ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 13.78 0.12 0.03 65.61 RNA5S12-201 rRNA skin of body (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 686.00 36.68 1.69 100.0 Y_RNA.14-201 misc RNA skin of body (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 39.00 29.32 0.10 100.0 SNORD115-34-201 snoRNA skin of body (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 1006.00 28.23 2.48 100.0 RNU5E-1-201 snRNA skin of body (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 8.00 2.53 0.02 100.0 SNORA31-201 snoRNA skin of body (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 7.00 0.18 0.02 70.0 RNA5SP389-201 rRNA pseudogene skin of body (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 5.00 0.13 0.01 100.0 RNA5SP389-201 rRNA pseudogene skin of body (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 17.00 0.44 0.04 65.38 RNA5SP389-201 rRNA pseudogene skin of body (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 3.00 0.08 0.01 100.0 RNA5SP389-201 rRNA pseudogene skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 1115.00 1.16 2.75 100.0 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 9622.00 9.98 23.70 74.2 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 10676.62 11.07 26.30 36.24 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 3901.00 4.05 9.61 76.61 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 4425.00 4.59 10.90 75.22 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3049.00 3.16 7.51 54.96 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 297.00 0.31 0.73 100.0 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1073.00 1.11 2.64 31.21 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 4498.00 4.67 11.08 44.4 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 943.22 0.98 2.32 49.0 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 4308.00 4.47 10.61 57.49 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 2525.00 2.62 6.22 100.0 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 19516.94 20.24 48.08 69.82 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 966.44 1.00 2.38 35.65 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 3302.00 3.42 8.13 90.39 RNU5A-1-201 snRNA skin of body (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 7065.00 78.77 17.40 100.0 SNORD114-14-201 snoRNA skin of body (Tissue)