ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 268697.92 26.04 661.93 26.46 C19orf48P-203 retained intron skin of body (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 2258.00 0.22 5.56 84.51 C19orf48P-203 retained intron skin of body (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 115.00 0.01 0.28 100.0 C19orf48P-203 retained intron skin of body (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 15.00 0.00 0.04 100.0 C19orf48P-203 retained intron skin of body (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 21.00 72.41 0.05 100.0 ENST00000597420 lncRNA skin of body (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 135.00 3.00 0.33 100.0 RPS11-206 retained intron skin of body (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 3938.00 87.45 9.70 100.0 RPS11-206 retained intron skin of body (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 80844.00 49.81 199.16 52.39 CARMN-209 lncRNA skin of body (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1942.00 29.70 4.78 100.0 ENST00000602478 lncRNA skin of body (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 3.00 50.00 0.01 100.0 PPFIA1P1-201 processed pseudogene skin of body (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 5181.00 37.04 12.76 100.0 SNORD114-21-201 snoRNA skin of body (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 4982.00 35.61 12.27 100.0 SNORD114-21-201 snoRNA skin of body (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 34.00 27.20 0.08 100.0 SNORD115-40-201 snoRNA skin of body (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 52087.00 98.69 128.31 100.0 MIR98-201 miRNA skin of body (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 69146.00 96.56 170.34 100.0 SNORD113-5-201 snoRNA skin of body (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 4762.00 94.30 11.73 100.0 MIR15A-201 miRNA skin of body (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 2240.00 83.36 5.52 100.0 MIR376C-201 miRNA skin of body (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1689.00 50.52 4.16 100.0 SNHG21-206 retained intron skin of body (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 147.00 10.43 0.36 100.0 SNORD11B-201 snoRNA skin of body (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1571.00 57.86 3.87 100.0 SNORD91B-201 snoRNA skin of body (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 20290.00 62.01 49.98 74.4 SNORD91A-201 snoRNA skin of body (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 60926.00 47.48 150.09 97.18 MIR486-1-201 miRNA skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 11990.00 9.61 29.54 75.45 NOP56-219 retained intron skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 2799.00 2.24 6.90 100.0 NOP56-219 retained intron skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 1347.00 1.08 3.32 100.0 NOP56-219 retained intron skin of body (Tissue)