ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 2151.00 1.12 5.30 100.0 RNY4-201 misc RNA skin of body (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1250.00 80.85 3.08 86.75 MIR3142HG-201 lncRNA skin of body (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 5554.00 80.35 13.68 100.0 SNHG6-204 retained intron skin of body (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 31279.00 36.57 77.05 100.0 MIR151A-201 miRNA skin of body (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 46040.00 53.83 113.42 88.7 MIR151A-201 miRNA skin of body (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 3698.00 96.50 9.11 100.0 DENND3-221 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 122.00 0.04 0.30 69.71 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 14.00 0.00 0.03 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 22.00 0.01 0.05 57.89 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 2895.00 0.84 7.13 76.57 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 16.00 0.00 0.04 42.11 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 838.00 0.24 2.06 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 1995.00 0.58 4.91 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 88.00 0.03 0.22 100.0 WDR74-204 protein coding skin of body (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 11534.00 83.03 28.41 100.0 HSPA8-211 retained intron skin of body (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 620.00 16.90 1.53 100.0 SCARNA9-201 lncRNA skin of body (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 68505.00 90.74 168.76 100.0 TAF1D-215 retained intron skin of body (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 840.00 1.11 2.07 100.0 TAF1D-215 retained intron skin of body (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 1956.00 16.76 4.82 100.0 HSPA8-215 retained intron skin of body (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 6753.00 57.85 16.64 100.0 HSPA8-215 retained intron skin of body (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 19.00 0.16 0.05 100.0 HSPA8-215 retained intron skin of body (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 1153.00 24.34 2.84 100.0 RPS2-215 retained intron skin of body (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 415086.00 87.52 1022.55 88.44 ENST00000548801 lncRNA skin of body (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1853.00 21.88 4.56 100.0 ENST00000554988 lncRNA skin of body (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 71.00 0.84 0.17 100.0 ENST00000554988 lncRNA skin of body (Tissue)