ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 2553.00 39.37 6.29 100.0 RNU2-36P-201 snRNA skin of body (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 900.00 0.90 2.22 100.0 SNORD19C-201 snoRNA skin of body (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 94549.00 94.83 232.92 98.8 SNORD19C-201 snoRNA skin of body (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2934.00 1.16 7.23 100.0 SNORD12B-201 snoRNA skin of body (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 78.00 0.03 0.19 100.0 SNORD12B-201 snoRNA skin of body (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 238036.00 93.92 586.39 98.28 SNORD12B-201 snoRNA skin of body (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 5027.00 48.17 12.38 100.0 Y_RNA.609-201 misc RNA skin of body (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 744.00 40.50 1.83 100.0 Y_RNA.612-201 misc RNA skin of body (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 895.00 1.99 2.20 100.0 SNORD71-201 snoRNA skin of body (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 780.00 1.73 1.92 100.0 SNORD71-201 snoRNA skin of body (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 41529.00 92.21 102.31 98.81 SNORD71-201 snoRNA skin of body (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1299.00 10.59 3.20 52.8 MIR194-2HG-201 lncRNA skin of body (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 9715.00 79.22 23.93 94.56 MIR194-2HG-201 lncRNA skin of body (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 5.00 0.13 0.01 100.0 LINC01783-201 lncRNA skin of body (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 143.00 96.62 0.35 100.0 RPS7P15-201 processed pseudogene skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1538.00 11.58 3.79 88.9 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 1632.00 12.29 4.02 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 135.00 1.02 0.33 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 491.00 3.70 1.21 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 3692.00 27.79 9.10 100.0 SNORD62B-201 snoRNA skin of body (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 103.00 93.64 0.25 100.0 MRPL32-203 nonsense mediated decay skin of body (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 480.00 89.89 1.18 100.0 ENST00000436739 lncRNA skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 2712.00 9.73 6.68 100.0 TMEM107-204 protein coding skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 125.00 0.45 0.31 100.0 TMEM107-204 protein coding skin of body (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 1227.00 4.40 3.02 87.14 TMEM107-204 protein coding skin of body (Tissue)