ENCFF001RMA

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 707.00 0.68 1.74 67.92 MT-TE-201 Mt tRNA skin of body (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 1009.00 0.96 2.49 100.0 MT-TE-201 Mt tRNA skin of body (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 83413.00 79.77 205.49 89.76 MT-TE-201 Mt tRNA skin of body (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 338.00 0.32 0.83 100.0 MT-TE-201 Mt tRNA skin of body (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 2248.00 53.26 5.54 100.0 MIR196A1-201 miRNA skin of body (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 379.00 6.74 0.93 100.0 MT-RNR1-201 Mt rRNA skin of body (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 409.00 7.28 1.01 100.0 MT-RNR1-201 Mt rRNA skin of body (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 4057.00 85.88 9.99 100.0 MIR454-201 miRNA skin of body (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 45.00 21.74 0.11 100.0 MIR501-201 miRNA skin of body (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 6357.00 91.38 15.66 100.0 MIR769-201 miRNA skin of body (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 37.00 71.15 0.09 100.0 KRTAP19-1-201 protein coding skin of body (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1765.00 42.35 4.35 100.0 MIR708-201 miRNA skin of body (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 1061.00 87.11 2.61 100.0 MIR509-3-201 miRNA skin of body (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 182.00 47.64 0.45 100.0 MIR543-201 miRNA skin of body (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 130.00 93.53 0.32 100.0 MIR301B-201 miRNA skin of body (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 3087.00 51.86 7.60 74.62 RNU1-82P-201 snRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 11291.00 40.30 27.82 100.0 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 923.00 3.29 2.27 100.0 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 80.00 0.29 0.20 100.0 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4805.00 17.15 11.84 74.73 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 373.00 71.32 0.92 100.0 U3.17-201 snoRNA skin of body (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 7336.00 67.68 18.07 100.0 SNORD17-201 snoRNA skin of body (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 96.00 50.53 0.24 100.0 SNORD72-201 snoRNA skin of body (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 5290.00 82.32 13.03 100.0 SNORD70B-201 snoRNA skin of body (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 4423.00 54.30 10.90 89.37 RNY4P18-201 misc RNA skin of body (Tissue)