ENCFF001RLZ

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 3675.00 0.60 3.47 100.0 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 12637.00 2.08 11.94 45.07 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 10365.00 1.70 9.79 76.22 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 8098.00 1.33 7.65 55.42 SNHG14-224 lncRNA heart (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3293.60 20.96 3.11 69.62 5S_rRNA.20-201 rRNA pseudogene heart (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 3079.00 12.92 2.91 100.0 HSPA9-211 retained intron heart (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 9262.00 38.88 8.75 68.05 HSPA9-211 retained intron heart (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 123119.00 74.38 116.31 100.0 DNM3OS-205 lncRNA heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 75104.00 2.31 70.95 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 452.00 0.01 0.43 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 4002.00 0.12 3.78 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2724.00 0.08 2.57 65.42 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 20890.00 0.64 19.73 97.79 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 198.00 0.01 0.19 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 768.00 0.02 0.73 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 4083.00 0.13 3.86 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 2445828.00 75.14 2310.54 99.73 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 3789.00 0.12 3.58 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 5046.00 0.16 4.77 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 5710.00 0.18 5.39 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 4152.00 0.13 3.92 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 6350.00 0.20 6.00 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 651.00 0.02 0.61 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 628.00 0.02 0.59 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 2148.00 0.07 2.03 100.0 GAS5-230 retained intron heart (Tissue)