ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 717.00 43.45 2.05 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 8.00 0.18 0.02 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 6.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 1228.00 0.55 3.50 32.62 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 269.00 16.15 0.77 77.08 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 199.00 11.94 0.57 42.52 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 262.00 11.74 0.75 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 161103.00 64.77 459.61 94.34 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1455.00 0.58 4.15 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 98.00 13.08 0.28 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 31.00 0.81 0.09 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 16.00 0.12 0.05 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 318.00 1.83 0.91 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 33.00 0.19 0.09 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 65.00 0.37 0.19 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 395.00 2.27 1.13 98.26 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 206.00 1.19 0.59 65.4 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 221.00 1.27 0.63 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1328.00 26.31 3.79 45.94 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 112.00 2.22 0.32 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 77.00 1.51 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 30.00 0.04 0.09 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 21.00 0.03 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 198.00 0.27 0.56 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA diencephalon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 58512.00 79.29 166.93 92.26 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA diencephalon (Tissue)