ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 253.00 0.01 0.72 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 3831.00 0.20 10.93 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 136.00 0.01 0.39 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1037.00 0.05 2.96 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 36294.00 1.87 103.54 69.95 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 921.00 0.05 2.63 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 208478.00 10.72 594.77 98.34 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1307.00 0.07 3.73 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 821.00 0.04 2.34 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 3.00 0.00 0.01 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 80619.00 4.15 230.00 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1214.00 0.06 3.46 76.35 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 336.40 0.02 0.96 54.08 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 53.00 0.00 0.15 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1579.00 0.08 4.50 61.61 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 578.00 0.03 1.65 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 599.00 0.03 1.71 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 290.00 0.01 0.83 100.0 SNHG1-248 lncRNA diencephalon (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 350090.00 41.77 998.77 100.0 SNHG14-315 lncRNA diencephalon (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 219780.00 26.22 627.01 95.09 SNHG14-315 lncRNA diencephalon (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 187811.00 22.41 535.81 87.91 SNHG14-315 lncRNA diencephalon (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 1179.00 0.95 3.36 100.0 SNHG5-273 lncRNA diencephalon (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 41241.33 33.26 117.66 41.22 SNHG5-273 lncRNA diencephalon (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 223.00 0.18 0.64 100.0 SNHG5-273 lncRNA diencephalon (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 348.00 0.28 0.99 100.0 SNHG5-273 lncRNA diencephalon (Tissue)