ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 133.80 0.90 0.38 52.47 RNA5-8SN2-201 rRNA diencephalon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 16.00 0.11 0.05 100.0 RNA5-8SN2-201 rRNA diencephalon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 471.00 3.18 1.34 100.0 RNA5-8SN2-201 rRNA diencephalon (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 122.00 0.82 0.35 100.0 RNA5-8SN2-201 rRNA diencephalon (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 4715.00 31.85 13.45 62.68 RNA5-8SN2-201 rRNA diencephalon (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 156.32 1.06 0.45 61.3 RNA5-8SN2-201 rRNA diencephalon (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 2.00 50.00 0.01 100.0 MIR7974-201 miRNA diencephalon (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 139.00 26.38 0.40 100.0 MIR376A1-201 miRNA diencephalon (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 111.00 21.06 0.32 100.0 MIR376A1-201 miRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 661.00 0.21 1.89 100.0 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1328.14 0.43 3.79 41.77 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 250512.00 81.23 714.69 99.72 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 3.00 0.00 0.01 100.0 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 10065.00 3.26 28.71 68.72 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 11907.00 3.86 33.97 71.6 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 3041.00 0.99 8.68 89.21 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1854.34 0.60 5.29 58.31 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 253.00 0.08 0.72 100.0 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 10.00 0.00 0.03 100.0 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 471.00 0.15 1.34 100.0 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 89.00 0.03 0.25 100.0 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 5420.56 1.76 15.46 53.38 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 3322.50 1.08 9.48 44.59 U2.3-201 snRNA diencephalon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 3010.00 0.98 8.59 100.0 U2.6-201 snRNA diencephalon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 589.00 1.38 1.68 56.85 ENST00000619323 lncRNA diencephalon (Tissue)