ENCFF001RLY

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 385.00 85.37 1.10 100.0 MIR301A-201 miRNA diencephalon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 2034.00 11.04 5.80 19.66 MIR130A-201 miRNA diencephalon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 16256.00 88.27 46.38 94.68 MIR130A-201 miRNA diencephalon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 246667.00 98.49 703.72 99.26 MIRLET7F2-201 miRNA diencephalon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 420.00 65.22 1.20 100.0 MIR652-201 miRNA diencephalon (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 615.00 87.36 1.75 100.0 MIR653-201 miRNA diencephalon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1644.00 70.38 4.69 100.0 MIR140-201 miRNA diencephalon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 282.00 14.19 0.80 100.0 MIR106B-201 miRNA diencephalon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 566.00 28.47 1.61 71.74 MIR106B-201 miRNA diencephalon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 24964.00 30.58 71.22 94.82 SNORD83A-201 snoRNA diencephalon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 54488.00 66.74 155.45 98.11 SNORD83A-201 snoRNA diencephalon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 461.00 70.17 1.32 100.0 SNORD41-201 snoRNA diencephalon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 950.00 14.62 2.71 74.8 MT-TF-201 Mt tRNA diencephalon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 28.00 0.43 0.08 100.0 MT-TF-201 Mt tRNA diencephalon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 26.00 0.40 0.07 63.41 MT-TF-201 Mt tRNA diencephalon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1825.00 10.89 5.21 100.0 MT-TV-201 Mt tRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 145.00 0.15 0.41 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 11176.00 11.55 31.88 94.86 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 4282.00 4.42 12.22 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 147.00 0.15 0.42 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 10874.00 11.23 31.02 80.84 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1733.00 1.79 4.94 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 19.00 0.02 0.05 100.0 MT-RNR2-201 Mt rRNA diencephalon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 1493.00 13.47 4.26 86.9 MT-TI-201 Mt tRNA diencephalon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 3870.00 34.92 11.04 100.0 MT-TI-201 Mt tRNA diencephalon (Tissue)